A pretty good README
March 2025
By Faith Okamoto
Figured I could do with some praise, and luckily enough, the first manuscript in
Bioinformatics’s “Advance articles” section fit the bill.
[Read More]
👋🏽 My CV is available. 👋🏽
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Don't Repeat Yourself
herein I repeat standard advice
By Faith OkamotoA recent pull request I made was supposed to just add a small function to a larger codebase. But, while poking around the code, I ran into egregiously non-DRY bits. Being who I am1, I refactored. Today’s rant is about DRY coding. I’m aware this has been done to death... [Read More] -
The art of toy data
How and why to make small test data
By Faith OkamotoA recent class project had me creating and documenting a small Python script (bach). As part of this process, I made toy data. This post will go over the process I used. [Read More] -
Use data files
February 2025
By Faith OkamotoI’m not making this whole blog into critiques. My February is just busy, and I don’t want to run out of time for this month’s critique. [Read More] -
Help others help you
January 2025
By Faith OkamotoTechnically this paper isn’t published yet, but it’s on biorXiv and has gone through revision with a journal, so I’m using it. Also I’ve just spent the better part of a week trying to use its software. [Read More]